TY - JOUR
T1 - Insights from the Molecular Docking of Hydrolytic Products of Methyl Isocyanate (MIC) to Inhibition of Human Immune Proteins
AU - Tripathi, Manish Kumar
AU - Yasir, Mohammad
AU - Gurjar, Vikram Singh
AU - Bose, Protiti
AU - Dubey, Amit
AU - Shrivastava, Rahul
N1 - Publisher Copyright:
© 2015, International Association of Scientists in the Interdisciplinary Areas and Springer-Verlag Berlin Heidelberg.
PY - 2015/9/26
Y1 - 2015/9/26
N2 - This study is an attempt to find the reason for immunological suppression in victims of Bhopal gas tragedy during 1984 against Mycobacterium tuberculosis (Mtb) infection. Here, we tried to understand this problem by studying interactions between immune proteins associated with susceptibility to tuberculosis and hydrolytic products of methyl isocyanate (MIC) released during the tragedy. The hydrolytic products of MIC i.e. dimethyl urea, trimethyl urea and trimethyl isocyanurate were docked to different human immune proteins against Mtb using AutoDock 4.0. Results shows that all hydrolytic products (dimethyl urea, trimethyl urea and trimethylisocyanurate) strongly inhibit to CD40 ligand, and their binding energies were found to be ΔG-3.51, -3.79, -4.55 (Kcal/mole), respectively. Further, to check the stability of docked complex, we performed the molecular dynamics simulation study which also shows that CD40 Ligand was maximally inhibited by trimethylisocyanurate and has a role in the macrophage activation for the destruction of M. tuberculosis. The present study may lead to better understanding of human immune protein inhibition by hydrolytic product of MIC.
AB - This study is an attempt to find the reason for immunological suppression in victims of Bhopal gas tragedy during 1984 against Mycobacterium tuberculosis (Mtb) infection. Here, we tried to understand this problem by studying interactions between immune proteins associated with susceptibility to tuberculosis and hydrolytic products of methyl isocyanate (MIC) released during the tragedy. The hydrolytic products of MIC i.e. dimethyl urea, trimethyl urea and trimethyl isocyanurate were docked to different human immune proteins against Mtb using AutoDock 4.0. Results shows that all hydrolytic products (dimethyl urea, trimethyl urea and trimethylisocyanurate) strongly inhibit to CD40 ligand, and their binding energies were found to be ΔG-3.51, -3.79, -4.55 (Kcal/mole), respectively. Further, to check the stability of docked complex, we performed the molecular dynamics simulation study which also shows that CD40 Ligand was maximally inhibited by trimethylisocyanurate and has a role in the macrophage activation for the destruction of M. tuberculosis. The present study may lead to better understanding of human immune protein inhibition by hydrolytic product of MIC.
KW - Hydrolytic product
KW - Immune suppression
KW - Methyl isocyanate
KW - Molecular docking
KW - Mycobacterium tuberculosis
UR - http://www.scopus.com/inward/record.url?scp=84942322669&partnerID=8YFLogxK
U2 - 10.1007/s12539-015-0012-3
DO - 10.1007/s12539-015-0012-3
M3 - Article
C2 - 26297312
AN - SCOPUS:84942322669
SN - 1913-2751
VL - 7
SP - 287
EP - 294
JO - Interdisciplinary Sciences: Computational Life Sciences
JF - Interdisciplinary Sciences: Computational Life Sciences
IS - 3
ER -